MCell 3.4 Released
- Details
- Published: Wednesday, 05 October 2016 16:04
MCell 3.4 Released
MCell version 3.4 has been released. For more information on MCell and to download version 3.4, see the MMBioS software page.
Research
Image Processing & Analysis Research Highlights
Tools for determining the spatial relationships
An important task for understanding how cells are organized is determining which components have spatial patterns that are related to each other. Read more
Pipeline for creation of spatiotemporal maps
Using a combination of diffeomorphic methods and improved cell segmentation, we developed a CellOrganizer pipeline for use in DPB4 to construct models of the 4D distributions of actin and 8 of its regulators during the response of T cells to antigen presentation. Read more
Development of models of cell and nuclear shape
We added a major new capability to our open source CellOrganizer system, the ability to construct diffeomorphic models of cell and nuclear shape. The models were developed because of the needs of DBP4... Read More
Anatomy and Function of an Excitatory Network in the Visual Cortex
MMBioS researcher Greg Hood’s collaboration with Wei-Chung Allen Lee of Harvard University and R. Clay Reid of the Allen Institute for Brain Science concerning the reconstruction of an excitatory nerve-cell network in the mouse brain cortex at a subcellular level using the AlignTK software has been published in Nature. Read more
Cellorganizer 2.0 Major Release
A major new release of the CellOrganizer system for creating image-derived models of cell shape and organization has just been published. Read more.